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Table 1 Summary of the mutations introduced into the rHPIV1 genomea.

From: Attenuation and efficacy of human parainfluenza virus type 1 (HPIV1) vaccine candidates containing stabilized mutations in the P/C and L genes

Gene

Mutationb

ORF

nt changes wt → mutantc

Type of mutation

Codon position

Amino acid change

# nt changes for reversion to wt

P/C

R84G

C

A GA → G GA

point

84

R → G

1

  

P

GA G → GG G

point

87

E → G

1

 

Δ170d

C

AGG GAT TT C → AGC

deletion

168–170

RDF → S (D deletion; 3 nt deletions in the flanking R-F codons results in a S substitution)

6 (insertions)d

  

P

GGA TTT→ deletion

deletion

172–173

GF deletion

6 (insertions)

HN

T553A

HN

A CC → G CC

point

553

T → A

1

L

Y942Ae

L

TATGCG

point

942

Y → A

3e

 

Δ1710–11d

L

GCT GAG→ deletion

deletion

1710–11

AE deletion

6 (insertions)d

  1. a HPIV1 strain Washington/1964, GenBank accession no. NC_003461.
  2. b The nomenclature used to describe each mutation indicates the wt amino acid, the codon position and the new amino acid, or the position of the deletion (Δ), with respect to the C, HN or L protein.
  3. c The nucleotides (nt) affected by substitution or deletion are shown underlined and in bold type.
  4. d Designed for increased genetic stability by use of a deletion. Deletions involved six nt to conform to the rule of six [20].
  5. e Designed for increased genetic stability by the use of a codon that differs by three nucleotides from codons yielding a wild type assignment.