Skip to main content

Advertisement

Table 2 Values for (non-)synonymous mutational rates and dN/dS ratios in astrovirus capsid protein genes

From: Different rates of (non-)synonymous mutations in astrovirus genes; correlation with gene function

Species VP34 VP27
TipBranche AccNum dN dS dN/dS dN dS dN/dS
Human1 Z25771 0.0063 0.0418 0.1507 0.0018 0.0701 0.0257
Human1 L23513 0.0030 0.0430 0.0698 0.0100 0.0219 0.4566
Human2 L13745 0.0267 0.5843 0.0457 0.2687 1.0243 0.2623
Human3 AF141381 0.0132 0.6429 0.0205 0.0670 0.5253 0.1275
Human4 DQ070852 0.0066 0.1794 0.0368 0.3372 7.8626 0.0429
Human5 DQ028633 0.0253 0.7471 0.0339 0.1589 0.6257 0.2540
Human6 Z46658 0.0276 0.5950 0.0464 0.1544 1.0149 0.1521
Human7 Y08632 0.0306 0.3748 0.0816 0.0827 0.8255 0.1002
Human8 AF260508 0.0011 0.2941 0.0037 0.1026 0.9374 0.1095
Sheep Y15937 0.1203 35.7089 0.0034 0.3946 60.6402 0.0065
Mink AY179509 0.1615 52.9013 0.0031 0.5333 14.9279 0.0357
Cat AF056197 0.0223 0.4164 0.0536 0.2495 1.0615 0.2350
Pig AB037272 0.1595 60.6407 0.0026 0.2829 4.6804 0.0604
Turkey1 Y15936 0.1673 27.0532 0.0062 0.1803 35.9325 0.0050
Turkey2 AF206663 0.2719 37.0278 0.0073 0.5306 17.7786 0.0298
ANV-1 AB033998 0.0831 1.9230 0.0432 0.1215 1.7471 0.0695
ANV-2 AB046864 0.1228 2.9662 0.0414 0.1172 0.2508 0.4673
  1. The viral species available are mentioned in the first column and specified by their accession numbers. One representative per human serotype was included. See also text and legend to Table 1.