|
DNA segment
|
MIMRs
|
mIMRs terminated by reverse dinucleotides
|
rdIMRs
|
|---|
| |
N*
|
max
|
FET
|
N*
|
max
|
FET
|
N*
|
length
|
max
|
FET
|
|---|
| | | |
p-value
| | |
p-value
| | | |
p-value
|
|---|
|
MA-CA-p2-NC
|
4337
|
-7
|
0.0513
|
2141
|
-7
|
0.0190
|
2529
|
all
|
4
|
0.0163
|
|
MA-CA-p2-NC
| | | | | | |
1267
|
≥ 16 nt
|
5
|
0.0526
|
|
MA-CA-p2
|
3907
|
-8
|
0.0084
|
2045
|
-7
|
0.0085
|
2196
|
all
| |
none
|
|
MA-CA-p2
| | | | | | |
1302
|
≥ 15 nt
|
-5
|
0.0356
|
|
MA – K&S
|
1463
|
-8
|
0.0088
|
746
|
-8
|
0.0034
| | | |
none
|
|
MA – promotif
| | | | | | | | | |
none
|
|
MA – promotif
| | | | | | |
502
|
≥ 15 nt
|
3
|
0.0154
|
|
CA
|
2364
|
7
|
0.0103
|
1312
|
6
|
0.0409
|
1354
|
all
|
4
|
0.0757
|
|
CA
| | | | | | |
637
|
≥ 16 nt
|
-2
|
0.0019
|
|
NC
|
421
|
-2
|
0.0004
|
144
|
-1
|
0.0110
|
334
|
all
|
1
|
0.0019
|
|
NC
| | | | | | |
149
|
≥ 16 nt
|
7
|
0.0422
|
|
NC
| | | | | | |
114
|
≥ 19 nt
|
7
|
0.0027
|
- The coincidence of IMRs and PSEs was tested for each of the sequentially cleaved segments, and found to be valid for all of them. For most segments, the correlation is improved when short IMRs below the essential value are removed, indicating that the coincidence is related to sequence segments longer than 15 nt.
