Table 3 mIMRs in gag that are ≥50% symmetrical
Rank | m-IMR ID | protein | length | DNA positions | protein positions | overlaps |
|---|---|---|---|---|---|---|
1 | #1-gag | MA | 95 | 0270-aa..ca-0364 | 091-RI..DT-122 | |
2 | #2-gag | CA | 87 | 0742-gg..tg-0828 | 248-GW..RM-276 | |
3 | #3-gag | NC-p1-p6 | 85 | 1256-aa..aa-1340 | 419-EG..GN-447 | |
#4-gag | MA | 82 | 0266-at..ca-0347 | 089-HQ..AQ-116 | ~#1-gag | |
#5-gag | CA | 81 | 0758-at..ta-0838 | 253-NP..PT-280 | ~#2-gag | |
4 | #6-gag | NC | 81 | 1171-aa..ga-1251 | 391-KC..CG-417 | |
5 | #7-gag | p2 | 80 | 1065-ac..ca-1144 | 356-PG..GN-382 | |
#8-gag | CA | 77 | 0764-ct..cc-0840 | 255-PP..PT-280 | ~#2-gag | |
#9-gag | gag | 77 | 1100-tg..gt-1176 | 367-MS..KC-392 | ~#7-gag | |
6 | #10-gag | CA | 76 | 0812-at..ta-0887 | 271-NK..DY-296 | |
7 | #11-gag | CA | 75 | 0920-ag..ga-0994 | 307-EQ..KT-332 | |
#12-gag | MA | 74 | 0299-ct..ac-0372 | 100-AL..GH-124 | ~#1-gag | |
#13-gag | MA | 71 | 0303-ag..ca-0373 | 102-DK..HS-125 | ~#1-gag | |
8 | #14-gag | CA | 69 | 0985-ga..ag-1053 | 329-DC..QG-351 | |
9 | #15-gag | CA | 64 | 0543-ca..aa-0606 | 181-PQ..LK-202 | |
#16-gag | CA | 64 | 0810-aa..aa-0873 | 271-NK..KE-291 | ~#10-gag | |
10 | #17-gag | p6 | 64 | 1362-gc..ag-1425 | 455-PT..QK-475 | |
#18-gag | MA | 63 | 0265-ca..ac-0327 | 089-HQ..QN-109 | ~#1-gag | |
11 | #1-NC | NC | 59 | 1209-aa..aa-1267 | 404-NC..QM-423 | |
12 | #2-NC | NC | 47 | 1153-aa..ca-1199 | 385-NQ..GH-400 |