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Table 4 The list of some of the genes of interest.

From: Altered gene expression in asymptomatic SHIV-infected rhesus macaques (Macacca mulatta)

Gene ID

Symbol

Gene Name

Fold Change

Cellular defense immunity:

   

AA424786

GOLGA2

golgi autoantigen, subfamily a2

2.802126

AA664195

HLA-DRB3 (HLA-DRB1)

major histocompatibility complex, class II, DR beta 1

0.202677

AI815229

LILRB3

leukocyte immunoglobulin-like receptor, subfamily B, member 3

0.074432

H96643

FOSL1

FOS-like antigen-1

0.284931

Cell growth/proliferation:

   

AA035384

SDHD

succinate dehydrogenase complex

0.287502

AA521228

HIBCH

3-hydroxyisobutyryl-Coenzyme A hydrolase

4.260302

AA699573

TCF2

hepatic transcription factor 2

4.223543

AI220577

TNP2

transition protein 2

0.262051

H06676

ALDH5A1

aldehyde dehydrogenase 5 family

2.381241

AI798238

P2RY11

peter pan homolog

0.174406

Cell death/Apoptosis:

   

AA458838

NOXA

phorbol-12-myristate-13-acetate-induced protein 1

3.872641

AI339248

Bit1

CGI-147 protein

0.337378

AI972925

API5

apoptosis inhibitor 5

0.17877

Molecular binding/Adhesion:

   

AA167269

NAP1L1

nucleosome assembly protein 1-like 1

0.272199

AA424824

DSTN

destrin

2.876146

AA669637

PNRC1

proline rich 2

0.142976

AA676840

UTRN

utrophin

2.340295

AI769340

HRC

histidine-rich calcium-binding protein

0.220777

R16712

ANLN

anillin

0.280955

T60070

RAB40B

GTP-binding protein, member RAS oncogene family

2.649082

AA426374

TUBA2

alpha tubulin 2

0.112352

AA055163

CASQ2

calsequestrin 2

0.531223

AA521350

Sep15

15 kDa selenoprotein

0.33198

AA633747

COL6A2

collagen, type VI, alpha 2

2.061697

AA634218

PRAF2

JM4 protein

0.35942

AA922998

PMS2L5

postmeiotic segregation increased 2-like 5

0.289763

AI364103

CINP

cyclin-dependent kinase 2-interacting protein

3.399017

AI653424

NUFIP1

nuclear fragile X mental retardation protein interacting protein 1

0.15423

W32272

IQGAP2

IQ motif containing GTPase activating protein

3.137166

Signal Transduction:

   

AA427491

TRAC

T-cell receptor active alpha-chain

0.145492

AI401275

CALCR

calcitonin receptor

0.329203

AA421819

CDH6

K-cadherin

0.241252

Transport:

   

AI675394

CLCA2

calcium activated chloride channel

3.802165

W94331

CTNS

nephropathic cystinosis

0.212335

N46828

ITPKC

inositol 1,4,5-trisphosphate 3-kinase C

5.969257

Biogenesis:

   

AA056013

MAGP2

Microfibril-associated glycoprotein-2

2.312604

AA629189

KRT4

keratin 4

0.227523

H27864

 

secretogranin II

0.089345

  1. The first, second and third columns list the GeneBank ID, Symbol and Gene Name respectively. The Fourth column stands for the corresponding fold change of SHIV positive animal with respect to that of the control animal, averaged over the entire population, i.e. (Average fold change for all SHIV positive animals)/(Avg FC for all control animals)