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Table 1 HdIV segments predicted to encode the rep genes analysed in this work. Segment names and putative sizes are indicated. Segment names were given alphabetically from the shortest to the longest; however only segments for which a real (completely sequenced; SH-E and SH-G) or estimated (PCR fragment; SH-J, SH-H and SH-A2 containing rep7 sequence) size could be given were named. SH-x and SH-y stand for segments of unknown size (since molecular weigh marker represents linear DNA).Rep7 is underlined because of discrepancy between PCR and Southern-blot results. For each segment, the rep gene(s) identified after sequencing of PCR amplification fragments or by Southern-blot analysis are reported

From: Members of the Hyposoter didymator Ichnovirus repeat element gene family are differentially expressed in Spodoptera frugiperda

segment

size (kbp)

sequencing/PCR

Southern-blot

SH-J

~6

rep5, rep11

rep4

SH-y

~5

--------

rep7?

SH-H

~5

rep6

 

SH-G

5.6

rep12

 

SH-E

4.6

rep1, rep2, rep3

 

SH-x

?

--------

rep8

SH-A2

3.1

rep7