Oligo Name | nt | Transcript Length (bp) | Distance from 3' (bp) | Tm (°C) | GC (%) | Design | Sense Probe Sequence (5' to 3') |
---|---|---|---|---|---|---|---|
EBNA1_AD.1 | 60 | 1131 | 202 | 76.1 | 45.0 | AD | TTTGAAGGATGCGATTAAGGACCTTGTTATGACAAAGCCCGCTCCTACCTGCAATATCAG |
EBNA1_AD.2 | 60 | 1131 | 803 | 79.0 | 55.0 | AD | GAGAGGTCGTGGACGTGGAGAAAAGAGGCCCAGGAGTCCCAGTAGTCAGTCATCATCATC |
EBNA2_AD.1 | 60 | 1464 | 687 | 79.0 | 53.3 | AD | GCACCCTCTTACTCATCAAAGCACCCCAAATGATCCAGATAGTCCAGAACCACGGTCCCC |
EBNA3A_AD.1 | 60 | 1360 | 29 | 76.9 | 48.3 | AD | GAAGCCATTCTCCGCAGGTTTCCACTAGATCTAAGAACACTTCTTCAAGCGATTGGAGCC |
EBNA3C_AD.1 | 60 | 2973 | 129 | 79.2 | 53.3 | AD | GACCTGCCCGGTGTTCCCAAGCTACTGCTGAAGCACAGGAGATTCTCAGTGACAATTCTG |
EBNA3C_AD.2 | 60 | 2973 | 893 | 79.1 | 51.7 | AD | TAAGGCCCAGCCCATAGAAAGTTCACACTTGAGTTCCATGTCGCCCACACAGCCGATATC |
LMP1.70 mer | 70 | 2038 | 813 | 88.3 | 47.1 | PE | CTGTTCATCTTTGGCTGCTTACTTGTCTTCGGTATCTGGATCTACTTCTTGGAGATTCTCTGGCGGCTTG |
LMP 2A&2B.70 mer | 70 | 1196 | 53 | 94.5 | 54.3 | PE | CCGACCCCATATCGCAACACTGTATAAAGAATGCCCACCAGATCGCCTGCCACTTCCACAGCAATGGCAC |
LMP2_AD.1 | 60 | 1196 | 199 | 77.0 | 48.3 | AD | AATGGCGACCGTCACTCGGACTATCAACCACTAGGAACCCAAGATCAAAGTCTGTACTTG |
BZLF1.70 mer | 70 | 1767 | 280 | 90.3 | 47.1 | PE | ACGCACACGGAAACCACAACAGCCAGAATCGCTGGAGGAATGCGATTCTGAACTAGAAATAAAGCGATAC |
gp85.70 mer | 70 | 2121 | 90 | 93.3 | 51.4 | PE | TCCACGTTCACTATCTGCTGCTGACCACCAACGGGACTGTCATGGAAATTGCGGGCCTGTATGAAGAAAGAG |
gp85_AD.1 | 60 | 2121 | 491 | 76.8 | 48.3 | AD | ATTATCCCGCTCATCAATGTGACATTCATAATCTCTAGTGACCGTGAGGTCCGAGGCTCG |
gL_AD.1 | 60 | 414 | 294 | 77.7 | 48.3 | AD | CGCGTTGGAAAACATTAGCGACATTTACCTGGTGAGCAATCAGACATGCGACGGCTTTAG |
g42_AD.1 | 60 | 672 | 259 | 76.0 | 46.7 | AD | CAACGCCCGATATTCTACCTGTGGTAACTAGAAATCTGAATGCCATTGAGTCCCTTTGGG |