Skip to main content

Table 1 Experimental Design for Microarray Experiments

From: Application of functional genomics to the chimeric mouse model of HCV infection: optimization of microarray protocols and genomics analysis

Experiment

Hybridization Temperature (°C)

*Channel 1

*Channel 2

**Up-Regulated Genes

  

HL

ML

HL

ML

2-fold

1.5-fold

1

60

1

-

1

-

0

0

2

60

1

1

1

-

1142

2388

3

60

0.5

0.5

1

-

1132

2401

4

60

0.8

0.2

1

-

483

959

5

65

0.8

0.2

1

-

328

646

  1. HL, human liver, ML, mouse liver,
  2. * numbers indicate ug of fluorescent labeled RNA
  3. ** The expression ratio for up-regulated genes have a P value ≤ 0.05 based on n = 2 for each experiment and Rosetta Resolver error-model specific for Agilent 22 K Human oligonucleotide microarray.
Back to article page

Virology Journal

ISSN: 1743-422X