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Table 1 Experimental Design for Microarray Experiments

From: Application of functional genomics to the chimeric mouse model of HCV infection: optimization of microarray protocols and genomics analysis

Experiment Hybridization Temperature (°C) *Channel 1 *Channel 2 **Up-Regulated Genes
   HL ML HL ML 2-fold 1.5-fold
1 60 1 - 1 - 0 0
2 60 1 1 1 - 1142 2388
3 60 0.5 0.5 1 - 1132 2401
4 60 0.8 0.2 1 - 483 959
5 65 0.8 0.2 1 - 328 646
  1. HL, human liver, ML, mouse liver,
  2. * numbers indicate ug of fluorescent labeled RNA
  3. ** The expression ratio for up-regulated genes have a P value ≤ 0.05 based on n = 2 for each experiment and Rosetta Resolver error-model specific for Agilent 22 K Human oligonucleotide microarray.