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Figure 3 | Virology Journal

Figure 3

From: Comparative analysis of hepatitis C virus phylogenies from coding and non-coding regions: the 5' untranslated region (UTR) fails to classify subtypes

Figure 3

Consistency and homoplasy indices. Moving-window averages of (a) character consistency with the whole-genome phylogeny for windows of 100 (red), 300 (blue), or 500 (black) nucleotides and (b) proportion of informative sites (red) and rescaled homoplasy index (black) for windows of 100 nucleotides as a function of the window midpoint in the whole-genome alignment. Regions corresponding to the 5' UTR (left) and NS5B (right) are indicated with grey bands, with a white band in the middle of NS5B to indicate the 329 nt Okamoto region.

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Virology Journal

ISSN: 1743-422X