Skip to main content

Advertisement

Table 3 Codon usage differences between regions 1 and 2 and 50 human genes.

From: Host-derived pathogenicity islands in poxviruses

Amino Acid Fraction of codons with different usage Codons that have statistically different usage*
Phe 0/2 -
Tyr 0/2 -
His 1/2 CAC
Gln 0/2 -
Asn 0/2 -
Lys 0/2 -
Asp 2/2 GAU, GAC
Glu 2/2 GAA, GAG
Cys 0/2 -
Leu 2/6 UUG, CUG
Ile 0/3 -
Val 0/4 -
Ser 1/6 UCG
Pro 2/4 CCU, CCG
Thr 2/4 ACC, ACG
Ala 2/4 GCU, GCG
Arg 4/6 CGU, CGC, AGA, AGG
Gly 0/4 -
Stop 2/3 UAG, UGA
  1. *Codon usage was considered different if p-value < 0.05