Table 3 CP gene nucleotide sequence identity (%) of cassava mosaic geminiviruses from Tanzania and other published CMG CP sequences. Values above 89% are in bold and names of isolates from Tanzania are in blue.
Virus Isolate | ACMV-[TZ] | EACMCV-[TZ1] | EACMCV-[TZ7] | EACMV-[KE/TZT] | EACM-[KE/TZM] | EACMV-[TZ/YV] | EACMV-UG2 [TZ10] |
|---|---|---|---|---|---|---|---|
ACMV-[CM] | 97 | 77 | 77 | 78 | 79 | 77 | 90 |
ACMV-[CI] | 96 | 77 | 78 | 78 | 79 | 77 | 90 |
ACMV-[KE] | 97 | 76 | 76 | 77 | 78 | 76 | 90 |
ACMV-[NG] | 96 | 77 | 77 | 78 | 78 | 77 | 90 |
ACMV-UGMld | 97 | 76 | 77 | 78 | 78 | 76 | 90 |
ACMV-[TZ] | - | 77 | 77 | 78 | 78 | 77 | 89 |
EACMCV-[CM] | 77 | 94 | 94 | 95 | 96 | 93 | 84 |
EACMCV-[TZ1] | 77 | - | 97 | 95 | 96 | 94 | 84 |
EACMCV-[TZ7] | 77 | 97 | - | 95 | 97 | 95 | 84 |
EACMMV-[K] | 77 | 80 | 80 | 80 | 80 | 80 | 79 |
EACMMV-[MH] | 77 | 79 | 80 | 80 | 80 | 80 | 79 |
EACMV-[KE/K2B] | 77 | 95 | 96 | 96 | 97 | 96 | 84 |
EACMV-TZ | 77 | 95 | 95 | 96 | 97 | 96 | 85 |
EACMV-[KE/TZT] | 78 | 95 | 95 | - | 97 | 95 | 85 |
EACMV-[KE/TZM] | 78 | 96 | 97 | 97 | - | 97 | 84 |
EACMV-[TZ/YV] | 77 | 94 | 95 | 95 | 96 | - | 84 |
EACMV-UG2 | 90 | 84 | 84 | 85 | 85 | 84 | 99 |
EACMV-UG2Mld | 89 | 84 | 84 | 85 | 85 | 84 | 98 |
EACMV-UG2Svr | 90 | 84 | 84 | 85 | 85 | 84 | 99 |
EACMV-UG2 [TZ10] | 89 | 84 | 84 | 85 | 84 | 84 | - |
EACMZV-[ZB] | 78 | 96 | 96 | 97 | 97 | 96 | 85 |
SACMV-[ZA] | 77 | 78 | 79 | 80 | 79 | 79 | 73 |
ICMV-[Tri] | 74 | 73 | 73 | 74 | 74 | 73 | 64 |
TGMV-[Com] | 63 | 65 | 65 | 64 | 64 | 65 | 78 |