Figure 3
Phylogenetic tree (1000 boot strap replications) showing the DNA-A complete nucleotide sequence relationships between the seven Tanzanian cassava mosaic geminivirus isolates (in blue) and other cassava mosaic geminiviruses. Tomato golden mosaic virus (TGMV-YV) (K02029) was used as the out group. Abbreviations and accession numbers are: ACMV-[CI], African cassava mosaic virus-[Côte d'Ivoire] (AF259894); ACMV-[NG/Ogo], African cassava mosaic virus-[Nigeria-Ogo] (AJ427910); ACMV-[CM/D02], African cassava mosaic virus-[Cameroon D02] (AF366902); ACMV-[CM/D03], African cassava mosaic virus-[Cameroon D03] (AY211885); ACMV-[CM/Mg], African cassava mosaic virus-[Cameroon Mg] (AY211884); ACMV-[CM], African cassava mosaic virus-[Cameroon] (AF112352); ACMV-[KE], African cassava mosaic virus-[Kenya] (J02057); ACMV-[NG], African cassava mosaic virus-[Nigeria] (X17095); ACMV-UGMld, African cassava mosaic virus-Uganda mild (AF126800); ACMV-UGSvr, African cassava mosaic virus-Uganda severe (AF126802); EACMCV-[CM/KO], East African cassava mosaic Cameroon virus-[Cameroon KO] (AY211887); EACMCV-[CM], East African cassava mosaic Cameroon virus-[Cameroon] (AF112354); EACMCV-[CI], East African cassava mosaic Cameroon virus-[Côte d'Ivoire] (AF259896); EACMMV-[K], East African cassava mosaic Malawi virus-[K] (AJ006460); EACMMV-[MH], East African cassava mosaic Malawi virus-[MH] (AJ006459); EACMV-[KE/k2B], East African cassava mosaic virus [Kenya-K2B] (AJ006458); EACMV-[TZ], East African cassava mosaic virus-[Tanzania] (Z53256); EACMV-UG2[2], East African cassava mosaic virus-Uganda2[2] (Z83257); EACMV-UG2Mld, East African cassava mosaic virus-Uganda2 mild (AF126804); EACMV-UG2Svr, East African cassava mosaic virus-Uganda2 severe (AF126806); EACMZV-[KE/Kil], East African cassava mosaic Zanzibar virus-[Kenya -Kil] (AJ516003); EACMZV-[ZB], East African cassava mosaic Zanzibar Virus – [Zanzibar] (AF422174); ICMV-[Adi2], Indian cassava mosaic virus – [Adivaram 2] (AJ575819); ICMV-[Mah], Indian cassava mosaic virus – [Maharashstra] (AJ314739); ICMV-[Mah2], Indian cassava mosaic virus – [Maharashstra 2] (AY730035); ICMV-[Tri], Indian cassava mosaic virus – [Trivandrum] (Z24758); SACMV-[M12], South African cassava mosaic virus-[Madagascar M12] (AJ422132); SACMV-[ZA], South African cassava mosaic virus – [South Africa] (AF155806); SACMV-[ZW], South African cassava mosaic virus – [Zimbabwe] (AJ575560); SLCMV-[Adi], Sri-Lankan cassava mosaic virus-[Adivaram] (AJ579307); SLCMV-[Col], Sri-Lankan cassava mosaic virus-[Colombo] (AF314737); SLCMV-[Sal], Sri-Lankan cassava mosaic virus-[Salem] (AJ607394).