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Table 2 Oligonucleotide primers used for RT-LAMP assay

From: A loop-mediated isothermal amplification assay for the visual detection of duck circovirus

Primer name Sequence (5′–3′) Genome position
FIP = F1c + F2 TTCAGGAATCCCTGAAGGTG-ATCGTCGGMGAGGAVAAGG F1c,203–222, F2,167–185
BIP = B1c + B2 GCGMGAGCTGCCGCCCT-TCTTCVTCAGATCCCCGG B1c,236–252, B2,292–309
F3 AGTTBTGCACGCTCGACAAT 135–154
B3 GTCGACTCTTTGGMGCAATA 320–339
LoopF AGGYGTVCCVTTCGCGC 186–202
LoopB AGGAAGAGCCTGGCTCTC 268–285
  1. Genome position according to the DuCV complete genome sequence (GenBank accession no. DQ100076).
  2. Abbreviations are as follows: M = A or C; V = A or C or G; B = T or G or C.