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Table 2 Percent nucleotide and deduced amino acid sequence identities between the full length DNA components and each open reading frame of ToRMV-[BR:Ub1:96] and ToSRV-[BR:PG1:Pep:03]

From: Recombination and pseudorecombination driving the evolution of the begomoviruses Tomato severe rugose virus (ToSRV) and Tomato rugose mosaic virus (ToRMV): two recombinant DNA-A components sharing the same DNA-B

Identity

DNA

Open reading frames2

 

A

B

CR1

Rep

TrAP

REn

AC4

CP

MP

NSP

Nucleotide

86.3

98.2

95

95.3

83.1

86.6

97.0

81.1

99.1

98.7

Amino acid

-

-

-

93.5

77.7

81.2

90.8

90.1

99.0

97.7

  1. 1CR, common region.
  2. 2Rep, replication-associated protein; TrAP, transcriptional activator protein; REn, replication enhancer protein; CP, coat protein; MP, movement protein; NSP, nuclear shuttle protein.
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Virology Journal

ISSN: 1743-422X