PCR | Gene | HAdV species | 1st-round primer (5′-3′) | 2nd-round primer (5′-3′) | 3rd-round primer (5′-3′) | Annealing temp. (C°) | Fragment size | |||
---|---|---|---|---|---|---|---|---|---|---|
Sense | Anti-sense | Sense | Anti-sense | Sense | Anti-sense | |||||
Generic PCR | Hexon | HAdV-D | AAGGCCGTCA | GTGCGGCTGG | ACAACTCGGGCTTCACCGGC | GGCTGGTGCA | None | None | 63 | 322 bp |
CCCTGCCCTT | TGCACTCTGA | CTCTGACCACG | ||||||||
Long distance PCR | PVII-Hexon | HAdV-D | CGCCCAGCAA | GTGCGGCTGG | GGCAGGACTCGCAGACGAGC | GGTGGGCTCA | GCGCGGAAAC | GGGATGCGCC | 60 | 4.8 kb |
TAACACCGGC | TGCACTCTGA | TCCATGGGGT | GTGTACTGGGT | ACATGACCCT |