Complete genome sequence of bacteriophage vB_YenP_AP5 which infects Yersinia enterocoliticaof serotype O:3

Leon-Velarde, Carlos G; Kropinski, Andrew M; Chen, Shu; Abbasifar, Arash; Griffiths, Mansel W; Odumeru, Joseph A

doi:10.1186/1743-422X-11-188

Virology Journal

Table 1 Bacterial strains used in this study; and host range of AP5 on 60 Yersinia strains at 25°C and at 37°C

From: Complete genome sequence of bacteriophage vB_YenP_AP5 which infects Yersinia enterocoliticaof serotype O:3

*Yersinia*strains	Description/Source	Biotype ¹	Serotype	Degree of lysis ²
Y. aldovae Z1	Unknown, Canada			N
Y. aldovae Z2	Unknown, Canada			N
Y. bercovieri Z3	Unknown, Canada			N
Y. bercovieri Z4	Unknown, Canada			N
Y. enterocolitica gk132	Unknown		O:1	2+
Y. enterocolitica JDE029	Human, Finland		O:1	3+
Y. enterocolitica gk2943	Unknown, Finland		O:2	3+
Y. enterocolitica gk1142	Hare, Finland		O:2	N
Y. enterocolitica K3	Patient isolate, Canada	3	O:3	2+
Y. enterocolitica K9	Patient isolate, Canada	3	O:3	3+
Y. enterocolitica K10	Patient isolate, Canada	3	O:3	3+
Y. enterocolitica K11	Patient isolate, Canada	3	O:3	3+
Y. enterocolitica K12	Patient isolate, Canada	3	O:3	2+
Y. enterocolitica K2	Patient isolate, Canada	4	O:3	3+
Y. enterocolitica K6	Patient isolate, Canada	4	O:3	3+
Y. enterocolitica A	Patient isolate, Canada	4	O:3	3+
Y. enterocolitica B	Patient isolate, Canada	4	O:3	1+
Y. enterocolitica K1	Patient isolate, Canada	4	O:3	2+
Y. enterocolitica 6471/76 (YeO3)	Patient isolate, Finland	4	O:3	3+
Y. enterocolitica 6471/76-c (YeO3-c)	plasmid (pYV) cured derivative of YeO3 [15]	4	O:3	2+
Y. enterocolitica YeO3-R1	Spontaneous rough derivative of YeO3-c [13]	4	O:3	N
Y. enterocolitica YeO3-R2	Spontaneous rough derivative of YeO3 [13]	4	O:3	N
Y. enterocolitica YeO3-OC	Δ(wzx-wbcQ) derivative of YeO3, mutant missing outer core operon [14]	4	O:3	3+
Y. enterocolitica YeO3-OCR	Δ(wzx-wbcQ) spontaneous rough derivative of YeO3-OC [14]	4	O:3	N
Y. enterocolitica E	Patient isolate, Canada	1A	O:5	N
Y. enterocolitica F	Patient isolate, Canada	1A	O:5	N
Y. enterocolitica C	Patient isolate, Canada	2	O:5,27	N
Y. enterocolitica D	Patient isolate, Canada	2	O:5,27	N
Y. enterocolitica K5	Patient isolate, Canada	2	O:5,27	N
Y. enterocolitica K7	Patient isolate, Canada	2	O:5,27	N
Y. enterocolitica K8	Patient isolate, Canada	2	O:5,27	N
Y. enterocolitica ATCC 9610	Patient isolate, USA	1	O:8	N
Y. enterocolitica ATCC 23715	Patient isolate, USA	1	O:8	N
Y. enterocolitica ATCC 27729	Patient isolate, Belgium	1	O:8	N
Y. enterocolitica I	Patient isolate, Canada	2	O:8	N
Y. enterocolitica J	Patient isolate, Canada	2	O:8	N
Y. enterocolitica K4	Patient isolate, Canada	2	O:8	N
Y. enterocolitica K20	Patient isolate, Canada	2	O:8	N
Y. enterocolitica K21	Patient isolate, Canada	2	O:8	N
Y. enterocolitica G	Patient isolate, Canada	2	O:9	N
Y. enterocolitica H	Patient isolate, Canada	2	O:9	N
Y. enterocolitica K13	Patient isolate, Canada	2	O:9	N
Y. enterocolitica K14	Patient isolate, Canada	2	O:9	N
Y. enterocolitica K15	Patient isolate, Canada	2	O:9	N
Y. frederiksenii Q	Unknown, Canada			N
Y. frederiksenii S	Unknown, Canada			N
Y. intermedia M	Unknown, Canada			N
Y. intermedia N	Unknown, Canada			N
Y. kristensenii Y	Unknown, Canada			N
Y. kristensenii X	Unknown, Canada			N
Y. kristensenii ATCC 33639	Hare, unknown			N
Y. mollaretii T	Unknown, Canada			N
Y. mollaretii U	Unknown, Canada			N
Y. pseudotuberculosis K	Patient isolate, Canada		I	N
Y. pseudotuberculosis L	Patient isolate, Canada		I	N
Y. rohdei V	Unknown, Canada			N
Y. rohdei W	Unknown, Canada			N
Y. ruckeri O	Unknown, Canada			N
Y. ruckeri P	Unknown, Canada			N
Y. ruckeri ATCC 29473	Rainbow trout, USA			N

¹Wauters et al. [2].
²Degree of lysis: 4+, complete lysis; 3+ clearing throughout but with faint hazy background, 2+ substantial turbidity throughout cleared zone, 1+ a few individual plaques; N: No effect of phage on bacterial growth as described by Kutter [16].

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ISSN: 1743-422X

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