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Figure 2 | Virology Journal

Figure 2

From: Frequent migration of introduced cucurbit-infecting begomoviruses among Middle Eastern countries

Figure 2

Maximum likelihood unrooted phylogeny of SLCV DNA-A isolated in this study, created in PAUP* using a general time reversible nucleotide substitution model with a gamma distribution of site heterogeneity. Sequences from Egypt (EG) are shown in shades of red, from Israel (IL) in shades of blue, Jordan (JO) in shades of green, Lebanon (LB) in shades of yellow and the regions of Palestine governed by the Palestinian Authority (PA) in shades of purple. Sequences from a common site were shown in the same shade, up to four sites per country. Bootstrap support of ≥85% from both PAUP* and RaxML trees is shown by a solid circle; an open circle denotes ≥85% support from only RaxML.

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