SLA tetramer peptide epitopes | Immunization strains 1-5 | |||||||
---|---|---|---|---|---|---|---|---|
1 | 2 | 3 | 4 | 5 | ||||
SwIV candidate epitope | Viral protein of origin | AA position* in virus | Nucleotide position* in virus | A/swine/Den mark/101310- 1/2011(H1N1pdm09) | A/swine/Denmark/101568-1/2011(H1pdmN2†) | A/swine/Denmark/19126/1993 (H1N1) | A/swine/Denmark/101490-3/2011(H1N1) | A/swine/Denmark/1037-2/2011(H1N2†) |
CTELKLSDY | NP | 44-52 | 130-156 | + | + | CTELQ LSDY | CTELQ LSDY | CTELQ LSDY |
GTEKLTITY | PB2 | 623-531 | 1567-1593 | + | + | + | + | + |
SSSFSFGGF | PB2 | 320-328 | 958-984 | + | + | + | + | + |
YVFVGTSRY | HA | 215-223 | 643-669 | + | + | YVS VES SKY | YVS VVS SKY | YVS VVS SKY |