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Table 2 Reference HEV sequences used in the phylogenetic analyses

From: Genetic heterogeneity of swine hepatitis E virus isolates from Yunnan province, China in 2011–2012

Genotype Strain Host Country Accession No.
I E11-Ban10 Human Bangladesh AB720034
  W2-1 Human China JQ655734
  C1 Human China:Xinjiang D11092
  HEVNE8L Human Myanmar D10330
  TK15/92 Human Nepal AF051830
  pSK-HEV-2 Human USA AF444002
II M Human Mexico M74506
III Arkell swine Canada AY115488
  SAAS-JDY5 swine China:Shanghai FJ527832
  WB1-Aichi wild boar Japan: Aichi DQ079628
  JMNG-Oki02C mongoose Japan: Okinawa AB236320
  JMY-Haw Human Japan: Sapporo AB074920
  SwJ570 swine Japan:Tochigi AB073912
  JRA1 Human Japan:Tokyo AP003430
  Osh-205 swine Kyrgyzstan: Osh AF455784
  Kernow-C1 Human United Kingdom JQ679014
  pSHEV-3 swine USA AY575859
  HEV-US1 Human USA AF060668
  HEV_RKI Human Germany FJ956757
  Thai-swHEV07 Swine Thailand EU375463
IV JYI-ChiSai01C Human China:Shanghai AB197674
  SS19 swine China:Guangdong JX855794
  swGX40 swine China:Guangxi EU676172
  Ch-S-1 swine China:Jilin EF077630
  CH-YT-1 Human China:Shangdong KC163335
  CH-YT-HEV02 Human China:Shangdong KC492825
  TW6196E Human China:Taiwan HQ634346
  IND-SW-00-01 Swine India AY723745
  HE-JA2 Human Japan: Hokkaido AB220974
  JTC-Kit-FH04L Human Japan:Hokkaido AB291959
  JYK-Tok03C Human Japan:Tokyo AB291964
  swKOR-1 swine South Korea FJ426403
  KNIH-hHEV4 Human South Korea FJ763142
  JKK-Sap Human Japan: Sapporo AB074917
  W3 Human China JQ655735
  CCC220 Human China:Jilin AB108537
  HEV-ZJ1 Swine China:Jiangsu JQ993308
  swCH189 Swine China: Gansu FJ610232
   Avian USA AY535004
  1. All references are full length genomic sequences, for each reference, the genotype, name, host, isolated country and accession number were recorded.