Detection and molecular characterization of porcine circovirus type 2 from piglets with Porcine Circovirus Associated Diseases in Colombia

Rincón Monroy, Maria Antonia; Ramirez-Nieto, Gloria Consuelo; Vera, Victor Julio; Correa, Jairo Jaime; Mogollón-Galvis, Jose Dario

doi:10.1186/1743-422X-11-143

Virology Journal

Table 4 Accession numbers and geographic origin of the ORF2 sequences included in the phylogenetic analysis

From: Detection and molecular characterization of porcine circovirus type 2 from piglets with Porcine Circovirus Associated Diseases in Colombia

GenBank accession	PCV2 strain ID/original	Country origin	Genotype	Genotype references
AB072302	No. 26	Japan	PCV-2a	Imai et al. (2001)
AF055391	nd	USA	PCV-2a	Meehan et al. (1998)
AF055392	nd	Canada	PCV-2a	Meehan et al. (1998)
AF109399	2-E	Canada	PCV-2a	Hamel et al. (2000)
AF154679	nd	Taiwan	PCV2-2a / 2B	Kuo et al. (1999)
AF117753	2-D	Canada	PCV-2a	Hamel et al. (2000)
AF201307	GER3	Germany	PCV-2a / 2C	Mankertz et al. (2000)
AF201309	SPA2	Spain	PCV-2a	Mankertz et al. (2000)
AF364094	nd	Taiwan	PCV-2a	Wang et al. (2001)
AF381175	BF	China	PCV-2a	Lu et al. (2001)
AY180397	Pingtung-5	China	PCV-2a	Liao et al. (2002)
AY256459	336	Hungary	PCV2-2a 2C	Dan et al. (2003)
AY321982	Fh14	France	PCV-2b	de Boisseson et al. (2004)
AY321983	Fh20	France	PCV-2b	de Boisseson et al. (2004)
AY321984	Fd3	France	PCV-2b	de Boisseson et al. (2004)
AY322001	Fh21	France	PCV-2b	de Boisseson et al. (2004)
AY484407	NL_Control_1	Netherlands	PCV-2b	Grierson et al. (2004)
AY484412	NL_Control_6	United Kingdom	PCV-2b	Grierson et al. (2004)
AY484415	NL_PMWS_3	United Kingdom	PCV-2b	Grierson et al. (2004)
AY556477	HuNan	China	PCV2- 2b 1C	Zhixin et al. (2004)
AY678532	ZS0401	China	PCV-2b	Zhou et al. (2004)
AY682997	ZC	China	PCV-2b	Wang et al. (2004)
AY691169	QZ0401	China	PCV-2b	Zhou et al. (2004)
AY699793	nd	USA	PCV2-2a 2E	Fenaux et al. (2004)
AY847748	BJW	Singapore	PCV2-2b 1B	Liu et al. (2005)
AY754017	Aust 6	Australia	PCV2-2a 2A	Muhling et al. (2005)
DQ151643	GS	China	PCV-2b	Ma et al. (2005)
DQ220728	FMV05-6317	Canada	PCV-2b	Tremblay et al. (2005)
DQ220734	FMV05-7389	Canada	PCV-2b	Tremblay et al. (2005)
DQ220736	FMV05-7537	Canada	PCV-2b	Tremblay et al. (2005)
DQ220739	FMV05-6302	Canada	PCV-2b	Tremblay et al. (2005)
DQ233257	ROM	Romania	PCV-2b	Cadar et al. (2007)
DQ629115	n32eu	USA	PCV-2b	Cheung et al. (2007)
DQ629117	k52	USA	PCV-2b	Cheung et al. (2007)
DQ861896	am22	Brazil	PCV-2b	Castro et al. (2006)
DQ861899	am9	Brazil	PCV-2b	Castro et al. (2006)
DQ861902	am21	Brazil	PCV-2b 1A	Castro et al. (2006)
DQ870484	hk102	USA	PCV-2a	Cheung et al. (2007)
DQ923524	15/23R	Brazil	PCV-2b	Dezen et al. (2010)
EF524517	GS04	China	PCV-2d	Wang et al. (2009)
EF524526	LN05	China	PCV-2e	Wang et al. (2009)
EF524533	GX0602	China	PCV-2e	Wang et al. (2009)
EF524539	TJ06	China	PCV-2d	Wang et al. (2009)
EU057185	P0404c/03	Brazil	PCV-2b	Esteves et al. (2007)
EU148503	DK1980PMWSfree	Denmark	PCV-2c	Dupont et al. (2008)
EU148505	DK1990PMWSfree	Denmark	PCV-2c	Dupont et al. (2008)
EU186062	Chile C	Chile	PCV-2b	Bucarey et al. (2007)
EF394775	05-22779	Canada	PCV2 –2a 2E	Tremblay et al. (2007)
EU519223	Chile-I	Chile	PCV-2b	Bucarey et al. (2007)
EU747125	PCU1	Korea	PCV-2a	Vijayachandran et al. (2008)
EU755378	BRA9	Brazil	PCV-2b	Chiarelli-Neto et al. (2009)
EU980087	isolate 5	Argentina	PCV-2b	Pereda et al. (2008)
EU980092	isolate 11	Argentina	PCV-2b	Pereda et al. (2008)
EU980093	isolate 11	Argentina	PCV-2b	Pereda et al. (2008)
FJ233907	SoPCV2b	Canada	PCV-2b	Chaiyakul et al. (2008)
FJ475129	BJ-1	China	PCV1	Zhou et al. (2008)
FJ905463	C7155	Korea	PCV-2b	Kim et al. (2009)
FJ905471	C7189	Korea	PCV-2a	Kim et al. (2009)
FN398024	Villa Clara V2	Cuba	PCV-2b	Pérez et al. (2010)
FN398025	Villa Clara V4	Cuba	PCV-2b	Pérez et al. (2010)
FN398026	Pinar del Rio	Cuba	PCV-2b	Pérez et al. (2010)
GQ404852	MN614	USA	PCV-2b	Li et al. (2010)
GU049341	Sp-10-7-54-13	Spain	PCV-2b	Fort et al. (2010)
GU049342	Sp-10-7-54-13	Spain	PCV-2b	Fort et al. (2010)
JN644769	SeUy1	Uruguay	PCV-2b	Ramos et al. (2010)
JN644770	SeUy2	Uruguay	PCV-2b	Ramos et al. (2010)
JN644771	SeUy3	Uruguay	PCV-2b	Ramos et al. (2010)

Back to article page

ISSN: 1743-422X

Contact us

Submission enquiries: journalsubmissions@springernature.com