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Table 4 Accession numbers and geographic origin of the ORF2 sequences included in the phylogenetic analysis

From: Detection and molecular characterization of porcine circovirus type 2 from piglets with Porcine Circovirus Associated Diseases in Colombia

GenBank accession PCV2 strain ID/original Country origin Genotype Genotype references
AB072302 No. 26 Japan PCV-2a Imai et al. (2001)
AF055391 nd USA PCV-2a Meehan et al. (1998)
AF055392 nd Canada PCV-2a Meehan et al. (1998)
AF109399 2-E Canada PCV-2a Hamel et al. (2000)
AF154679 nd Taiwan PCV2-2a / 2B Kuo et al. (1999)
AF117753 2-D Canada PCV-2a Hamel et al. (2000)
AF201307 GER3 Germany PCV-2a / 2C Mankertz et al. (2000)
AF201309 SPA2 Spain PCV-2a Mankertz et al. (2000)
AF364094 nd Taiwan PCV-2a Wang et al. (2001)
AF381175 BF China PCV-2a Lu et al. (2001)
AY180397 Pingtung-5 China PCV-2a Liao et al. (2002)
AY256459 336 Hungary PCV2-2a 2C Dan et al. (2003)
AY321982 Fh14 France PCV-2b de Boisseson et al. (2004)
AY321983 Fh20 France PCV-2b de Boisseson et al. (2004)
AY321984 Fd3 France PCV-2b de Boisseson et al. (2004)
AY322001 Fh21 France PCV-2b de Boisseson et al. (2004)
AY484407 NL_Control_1 Netherlands PCV-2b Grierson et al. (2004)
AY484412 NL_Control_6 United Kingdom PCV-2b Grierson et al. (2004)
AY484415 NL_PMWS_3 United Kingdom PCV-2b Grierson et al. (2004)
AY556477 HuNan China PCV2- 2b 1C Zhixin et al. (2004)
AY678532 ZS0401 China PCV-2b Zhou et al. (2004)
AY682997 ZC China PCV-2b Wang et al. (2004)
AY691169 QZ0401 China PCV-2b Zhou et al. (2004)
AY699793 nd USA PCV2-2a 2E Fenaux et al. (2004)
AY847748 BJW Singapore PCV2-2b 1B Liu et al. (2005)
AY754017 Aust 6 Australia PCV2-2a 2A Muhling et al. (2005)
DQ151643 GS China PCV-2b Ma et al. (2005)
DQ220728 FMV05-6317 Canada PCV-2b Tremblay et al. (2005)
DQ220734 FMV05-7389 Canada PCV-2b Tremblay et al. (2005)
DQ220736 FMV05-7537 Canada PCV-2b Tremblay et al. (2005)
DQ220739 FMV05-6302 Canada PCV-2b Tremblay et al. (2005)
DQ233257 ROM Romania PCV-2b Cadar et al. (2007)
DQ629115 n32eu USA PCV-2b Cheung et al. (2007)
DQ629117 k52 USA PCV-2b Cheung et al. (2007)
DQ861896 am22 Brazil PCV-2b Castro et al. (2006)
DQ861899 am9 Brazil PCV-2b Castro et al. (2006)
DQ861902 am21 Brazil PCV-2b 1A Castro et al. (2006)
DQ870484 hk102 USA PCV-2a Cheung et al. (2007)
DQ923524 15/23R Brazil PCV-2b Dezen et al. (2010)
EF524517 GS04 China PCV-2d Wang et al. (2009)
EF524526 LN05 China PCV-2e Wang et al. (2009)
EF524533 GX0602 China PCV-2e Wang et al. (2009)
EF524539 TJ06 China PCV-2d Wang et al. (2009)
EU057185 P0404c/03 Brazil PCV-2b Esteves et al. (2007)
EU148503 DK1980PMWSfree Denmark PCV-2c Dupont et al. (2008)
EU148505 DK1990PMWSfree Denmark PCV-2c Dupont et al. (2008)
EU186062 Chile C Chile PCV-2b Bucarey et al. (2007)
EF394775 05-22779 Canada PCV2 –2a 2E Tremblay et al. (2007)
EU519223 Chile-I Chile PCV-2b Bucarey et al. (2007)
EU747125 PCU1 Korea PCV-2a Vijayachandran et al. (2008)
EU755378 BRA9 Brazil PCV-2b Chiarelli-Neto et al. (2009)
EU980087 isolate 5 Argentina PCV-2b Pereda et al. (2008)
EU980092 isolate 11 Argentina PCV-2b Pereda et al. (2008)
EU980093 isolate 11 Argentina PCV-2b Pereda et al. (2008)
FJ233907 SoPCV2b Canada PCV-2b Chaiyakul et al. (2008)
FJ475129 BJ-1 China PCV1 Zhou et al. (2008)
FJ905463 C7155 Korea PCV-2b Kim et al. (2009)
FJ905471 C7189 Korea PCV-2a Kim et al. (2009)
FN398024 Villa Clara V2 Cuba PCV-2b Pérez et al. (2010)
FN398025 Villa Clara V4 Cuba PCV-2b Pérez et al. (2010)
FN398026 Pinar del Rio Cuba PCV-2b Pérez et al. (2010)
GQ404852 MN614 USA PCV-2b Li et al. (2010)
GU049341 Sp-10-7-54-13 Spain PCV-2b Fort et al. (2010)
GU049342 Sp-10-7-54-13 Spain PCV-2b Fort et al. (2010)
JN644769 SeUy1 Uruguay PCV-2b Ramos et al. (2010)
JN644770 SeUy2 Uruguay PCV-2b Ramos et al. (2010)
JN644771 SeUy3 Uruguay PCV-2b Ramos et al. (2010)
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Virology Journal

ISSN: 1743-422X