Figure 9
From: First genome sequences of Achromobacter phages reveal new members of the N4 family
Phylogenetic tree based on the proteomes of 24 N4-like phages. The tree was inferred from pairwise distances, assessed via the GBDP approach [57–59], and using the balanced minimum evolution principle [60]. The tree was rooted via midpoint rooting [61]. GBDP used BLAST + [62] as a local alignment programme (i.e., blastp using an initial word length of 3) and applied the following settings for the pairwise distance calculation: trimming algorithm, formula d5 and no e-value filter.