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Table 1 Refinement and validation statistics for the CHAP K structure

From: Crystal structure of the lytic CHAPK domain of the endolysin LysK from Staphylococcus aureus bacteriophage K

 

Native

Derivative

PDB code

4CSH

4CT3

Space group

P 1

P 1

Cell edges (a, b, c, Ã…)

39.2, 61.5, 73.2

39.0, 61.5, 72.8

Cell angles (α, β, γ, º)

91.5, 98.7, 90.1

91.8, 98.7, 90.0

Resolution range used (Ã…)

32.9-1.79 (1.88-1.79)a

61.5-1.69 (1.78-1.69)

Multiplicity

2.0 (1.9)

3.4 (3.2)

Completeness

97.2 (94.3)

64.7 (10.4)

Mean <I/sigma(I)>

6.3 (2.9)

11.8 (1.8)

Rsym (%)b

9.1 (25.1)

6.0 (62.0)

Number of reflections used

59686 (8628)

46067 (1349)

Number of reflections used for R-free

2338 (112)

2431 (62)

R-factorc

0.175 (0.233)

0.181 (0.278)

R-free

0.201 (0.282)

0.224 (0.295)

Number of atoms (protein/water/other)

5286/741/66

5259/770/104

Average B-value/Wilson B-value (Ã…2)

18.4/14.5

22.2/14.9

Ramachandran statisticsd (%)

97.7/100.0

98.2/100.0

R.m.s. deviationse (bonds, Å/angles, °)

0.015/1.49

0.012/1.37

  1. aValues in parentheses are for the highest resolution bin, where applicable.
  2. bRsym=ΣhΣi|Ihi-<Ih>|/ΣhΣi|Ihi|, where Ihi is the intensity of the i th measurement of the same reflection and <Ih> is the mean observed intensity for that reflection.
  3. cR=Σ||Fobs(hkl)|-|Fcalc(hkl)||/Σ|Fobs(hkl)|.
  4. dDetermined with MOLPROBITY. The percentages are indicated of residues in favoured and allowed regions of the Ramachandran plot, respectively.
  5. eProvided by REFMAC.