Primer | Sequence | Genome position* | Length (bp) |
---|---|---|---|
TBEV-F3 | ACCATAAATGCCGACTGTGA | 3319–3338 | 20 |
TBEV-B3 | TGCCACCACCATTGAGC | 3500–3516 | 17 |
TBEV-FIP | CGGCAGCACCACTCTGGAATTCGGGGGCTTCTGTGAGGA | 3345–3361 | 39 |
3385–3404 | |||
TBEV-BIP | TGCACACTACCTCCAGTGACGTGAATTCATGAACAGGACGTATTTCC | 3409–3430 | 47 |
3462–3480 | |||
TBEV-LF | ACCTTGCCACTCTCTGTGG | 3365–3383 | 19 |
TBEV-LB | ACGGGGACAGACTGTTGGTATGC | 3436–3485 | 23 |
FE-F3 | TTGACCTTGCTCAGACTGTC | 1547–1566 | 20 |
FE-B3 | CGTCCATTTTCACAGCGTGT | 1713–1732 | 20 |
FE-FIP | TGAACCAGTCCCGGTGGACCTTGGAGCTTGACAAGACCTC | 1569–1589 | 40 |
1615–1633 | |||
FE-BIP | GCCCTGCCGTGGAAACATGAGGAGCTCCAAACTCAACCA | 1642–1663 | 39 |
1694–1710 | |||
FE-LF | CAGGCCGTCGGTAGGTGTTC | 1591–1610 | 20 |
FE-LB | GGGAGCACAAAACTGGAACA | 1662–1681 | 20 |
Sib-F3 | CCACTCTGGCTGAAGAACAT | 1211–1230 | 20 |
Sib-B3 | ATTGGCGGCAACGTAGTC | 1417–1434 | 18 |
Sib-FIP | GCCCTTTCCAAACAGTCCGCAAGCACGGTGTGCAAGAGAG | 1240–1255 | 40 |
1285–1305 | |||
Sib-BIP | TGAGGCAAAGAAGAAGGCCACTCGTGTGTGGCTCAACCTTA | 1335–1356 | 41 |
1395–1413 | |||
Sib-LF | CCCAGCCTCGATCACTCTGGT | 1256–1276 | 21 |
Sib-LB | GGACATGTGTATGACGCCAACAAG | 1357–1380 | 24 |
EU-F3 | CGCAAAACTGGAATAACGCA | 1667–1686 | 20 |
EU-B3 | CCACTTCGCAGGTCACATG | 1831–1849 | 19 |
EU-FIP | ACTCCAGTCTGGTCTCCGAGGACTGGTTGAATTTGGGGCTC | 1691–1711 | 41 |
1741–1760 | |||
EU-BIP | GTTACTGAAGGCTCTCGCTGGGGCCACTCTTCAGGTGGTACT | 1761–1783 | 42 |
1811–1829 | |||
EU-LF | ACACGTCCATCTTGACAGCGT | 1715–1735 | 21 |
EU-LB | GTTCCTGTGGCACACATTGA | 1783–1802 | 20 |