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Table 1 The primers used in the present study

From: Analysis and mapping of a 3 coterminal transcription unit derived from human cytomegalovirus open reading frames UL30–UL32

Experiments

Primer names

Primer sites (5-3)

Primer sequences (5-3)

cDNA library screening

P1-F

37664-37645

ACAGCGAGCAGCAGGAGTT

 

P1-R

37365-37384

AGAGCCCGTCGTGATAGTCC

 

P2-F

38763-38744

ACCGCCTGCGACTGCCGCAT

 

P2-R

38564-38583

TACAACAACACGCAGGGCTG

Northern blotting a and RT-PCR

P0-F

37250-37231

TAGTCTCGTTTTTTATTAAA

 

P0-R

37011-37030

CAGTCCGCGACGATCCACAG

 

P1-Fb

37664-37645

ACAGCGAGCAGCAGGAGTT

 

P1-Rb

37365-37384

AGAGCCCGTCGTGATAGTCC

 

P2-Fb

38763-38744

ACCGCCTGCGACTGCCGCAT

 

P2-Rb

38564-38583

TACAACAACACGCAGGGCTG

 

P3-F

40306-40288

CGTCGGTGTTCCTTCCTT

 

P3-R

39997-40014

CATGCCCGTCGTGCTCTT

 

P4-F

42945-42926

GTCAACTTTCTGCGCCATCT

 

P4-R

42498-42516

GCTGCACCTCCGTATCCTT

 

P3-1-F

40673-40654

AGAAACCGGTGCTGGGCAAG

 

P3-1-R

40430-40447

ACGGACGCCGAGGCTGAC

 

P3-2-F

41023-41005

TCCCTTCAGGATGCCTACG

 

P3-2-R

40784-40801

TCGGACGACGGTGTTGTG

 

P3-3-F

41361-41344

GATCCGCGTTTCACCGAC

 

P3-3-R

41115-41132

CCCAGGGCGAGTTACCGT

3 RACE

GSP-3’out primer

37713- 37694

CATGTAGCCGACTTGGAGGA

 

P1-F

37664-37645

ACAGCGAGCAGCAGGAGTT

 

P2-R

38564 -38583

TACAACAACACGCAGGGCTG

 

UL31-3’-in

39310-39327

CCGCAACCCGTCACTCTT

5 RACE

GSP-5’out primer

37342- 37359

AAAGGCACGCTGTTGACG

 

P1-R

37365-37384

AGAGCCCGTCGTGATAGTCC

 

GSP-5’-2

37801-37820

CGGGAAGAGGTTCTTCTCCC

 

GSP-5’-3

38349-38367

ACGTGGTGACCTCGTGGAT

 

GSP-5’-4

38743-38762

CATGCGGCAGTCGCAGGCGG

 

GSP-5’-5

42522-42539

GCACAAAGGCGATGGGTT

 

GSP-5’-6

42803-42823

CGGTAGTATCCCAACCAAAGC

  1. a. The additional oligonucleotide of 5-AATACGACTCACTATAGG-3 was added to the 5 ends of the reverse primers for the templates of all the Northern blotting probes and acted as the promoter of T7 RNA polymeras.
  2. b. These primers were for the template of the complementary probes of probe-1 and anti-probe-1, as well as probe-2 and anti-probe-2, which were switched as the forward and reverse primers.