The complete genome sequence of EC1-UPM, a novel N4-like bacteriophage that infects Escherichia coli O78:K80

Han Ming Gan; Chin Chin Sieo; Shirley Gee Hoon Tang; Abdul Rahman Omar; Yin Wan Ho

doi:10.1186/1743-422X-10-308

Virology Journal

Table 1 Orthologous group of proteins conserved across bacteriophages EC1-UPM, vB_EcoP_G7C (E), IME11 (I) and KBNP21 (K) as identified by PanOCT (>70% Identity and > 70% aligned length)

From: The complete genome sequence of EC1-UPM, a novel N4-like bacteriophage that infects Escherichia coli O78:K80

Protein ID	Product Description	% Identity			InterProscan ID
Protein ID	Product Description	E	I	K	InterProscan ID
AGC31510	hypothetical protein	87	95	97
AGC31513	RNA polymerase RNAP1 subunit A	96	94	98
AGC31517	hypothetical protein	94	93	96
AGC31519	putative phage protein	74	90	84
AGC31522	hypothetical protein	82	99	99
AGC31523	hypothetical protein	91	88	91
AGC31525	RNA polymerase subunit B	95	96	99
AGC31526	RNA polymerase subunit A	88	96	97	IPR002092
AGC31527	capsid decorating protein	79	91	93	IPR003599; IPR007110; IPR013783
AGC31528	hypothetical protein	98	97	97
AGC31531	hypothetical protein	95	97	95
AGC31533	hypothetical protein	95	95	95	IPR027417
AGC31534	hypothetical protein	95	97	99	IPR018698; IPR025154
AGC31537	putative membrane immunity protein	86	98	94	IPR016410
AGC31539	hypothetical protein	88	94	95
AGC31540	thymidilate synthase	84	90	95	IPR003669
AGC31543	hypothetical protein	76	80	82
AGC31545	rIIA-like protein	86	91	94	IPR003594
AGC31546	rIIB-like protein	88	89	87
AGC31547	hypothetical protein	90	96	95
AGC31549	DNA helicase	98	99	99	IPR027417; IPR027785
AGC31550	hypothetical protein	97	99	98
AGC31551	DNA polymerase	98	98	97	IPR001098; IPR002298; IPR012337
AGC31552	hypothetical protein	92	91	99
AGC31555	hypothetical protein	97	95	98
AGC31557	DNS protein	97	96	100	IPR014820
AGC31558	hypothetical protein	99	99	99
AGC31559	ssDNA-binding protein	95	97	97
AGC31560	hypothetical protein	99	99	98
AGC31561	hypothetical protein	76	92	94
AGC31567	putative structural protein	88	85	85
AGC31568	hypothetical protein	92	93	94
AGC31569	putative tail protein	94	82	96
AGC31570	hypothetical protein	96	97	99
AGC31571	major coat protein	97	97	100
AGC31572	hypothetical protein	95	93	96
AGC31573	hypothetical protein	99	96	100
AGC31574	portal protein	97	97	99
AGC31576	N-acetylmuramidase	95	97	98	IPR008565; IPR018537
AGC31502	terminase subunit A	98	98	100	IPR004921
AGC31503	hypothetical protein	98	98	100
AGC31504	hypothetical protein	80	91	85
AGC31505	hypothetical protein	81	76	77
AGC31506	hypothetical protein	87	74	80

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