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Table 4 Percent nucleotide identity of the L protein, P1 capsid, P2 non-structural, P3 non-structural and 3′UTR regions of Sing-M105-02 compared to Sing-M100-02 and other EMCV strains

From: A highly divergent Encephalomyocarditis virus isolated from nonhuman primates in Singapore

Virus strain

Proposed lineage

L

P1

P2

P3

3′ UTR

Sing-M100-02

D

100.0

99.9

99.9

100.0

100.0

EMCV Ruckert (M81861)

A

79.1

75.6

74.9

74.8

84.1

EMCV pV21 (X74312)

79.1

75.6

74.7

75.0

85.7

EMCV PV2 (X87335)

80.1

74.9

75.4

74.8

85.6

EMCV B (M22457)

79.1

74.9

75.1

74.7

85.4

EMCV D (M22458)

80.1

75.0

75.1

74.7

85.6

EMCV Mengo M (L22089)

C

81.6

76.1

74.5

74.9

87.9

EMCV 1086C (DQ835185)

B

86.1

75.5

73.1

73.3

NA

EMCV RD1338 (JX257003)

E

80.1

67.7

76.4

77.3

81.2

  1. The proposed EMCV lineage is also indicated. The virus strains names are shown followed by the GenBank accession number in brackets. NA indicates sequence data not available.