Table 1 Amino acid sequence of the tetrameric repeats that constitute the CVR of the B602L gene identified in viruses belonging to p72 genotype IX
Isolat | Country | p72 genotype | CVR amino acid sequence | No. of repeats | CVR enBank accession no. | Reference |
|---|---|---|---|---|---|---|
Ug13. Kampala1 | Uganda | IX | AAAA--A----------BNABNaBA | 13 | KC990856 | This study |
Ug12. Kampala4 | Uganda | IX | AAAABNABBNABB-----aaBBNABNaBA | 24 | KC990870 | This study |
Ug11. Mpigi | Uganda | IX | AAAABNABBNABB-----aaBBNABNaBA | 24 | KC990861 | This study |
Ug12. Wakiso | Uganda | IX | AAAABNABBNABB-----aaBBNABNaBA | 24 | KC990867 | This study |
Ug10. Adjumani2 | Uganda | IX | AAAABNABBNABB-----aaBBNABNaBA | 24 | KC990860 | This study |
Ug10. Moyo1 | Uganda | IX | AAAABNABBNABB-----aaBBNABNaBA | 24 | KC990863 | This study |
Ug12. Lira | Uganda | IX | AAAABNABBNABB-----aaBBNABNaBA | 24 | KC990865 | This study |
Ug10. Amuru | Uganda | IX | AAAABNABBNABB-----aaBBNABNaBA | 24 | KC990868 | This study |
Ug12. Kabale1 | Uganda | IX | AAAABNABBNABB-----aaBBNABNaBA | 24 | KC990857 | This study |
Ug11. Kampala2 | Uganda | IX | -AAABNABBNABB------aaBBNABNaBA | 23 | KC990859 | This study |
Ug12. Kampala3 | Uganda | IX | -AAABNABBNABB------aaBBNABNaBA | 23 | KC990866 | This study |
Ug10. Namasuba | Uganda | IX | -AAABNABBNABB------aaBBNABNaBA | 23 | KC990873 | This study |
Ug10. Tororo | Uganda | IX | -AAABNABBNABB------aaBBNABNaBA | 23 | KC990862 | This study |
Ug13. Busia1 | Uganda | IX | -AAABNABBNABB------aaBBNABNaBA | 23 | KC990871 | This study |
Ug13. Busia2 | Uganda | IX | -AAABNABBNABB------aaBBNABNaBA | 23 | KC990872 | This study |
Ug10. Kumi | Uganda | IX | -AAABNABBNABB------aaBBNABNaBA | 23 | KC990858 | This study |
Ug10. Moyo2 | Uganda | IX | -AAABNABBNABB------aaBBNABNaBA | 23 | KC990864 | This study |
Ug12. Kyenjojo | Uganda | IX | -AAABNABBNABB------aaBBNABNaBA | 23 | KC990869 | This study |
Ken11/KakSP | Uganda | IX | -AAABNABBNABB------aaBBNABNaBA | 23 | AGC93414.1 | [11] |
Ken11/Kia2.1 | Kenya | IX | -AAABNABBNABB------aaBBNABNaBA | 23 | AGC93412.1 | [11] |
Ken10/Kis028 | Kenya | IX | -AAABNABBNABB------aaBBNABNaBA | 23 | AGC93410.1 | [11] |
Ken10/KAKFA1 | Kenya | IX | -AAABNABBNABB------aaBBNABNaBA | 23 | AGC93408.1 | [11] |
Ken11/ThikP06 | Kenya | IX | -AAABNABBNABB------aaBBNABNaBA | 23 | AGC93413.1 | [11] |
Ken11/Bus1.2 | Kenya | IX | -AAABNABBNABB------aaBBNABNaBA | 23 | AGC93411.1 | [11] |
Ken10/Kis027 | Kenya | IX | -AAABNABBNABB------aaBBNABNaBA | 23 | AGC93409.1 | [11] |
UG07. Wak2 | Uganda | IX | -AAABNABBNABB-------aa-BNABNaBA | 22 | ACZ18202.1 | [12] |
UG07. Wak4 | Uganda | IX | -AAABNABBNABB-------aa-BNABNaBA | 22 | ACZ18204.1 | [12] |
UG07.F7 | Uganda | IX | -AAABNABBNABB-------aa-BNABNaBA | 22 | ACZ18206.1 | [12] |
UG07. Wak1 | Uganda | IX | -AAABNABBNABB-------aa-BNABNaBA | 22 | ACZ18201.1 | [12] |
UG07. Mukono | Uganda | IX | -AAABNABBNABB-------aa-BNABNaBA | 22 | ACZ18205.1 | [12] |
UG07.F8 | Uganda | IX | -AAABNABBNABB-------aa-BNABNaBA | 22 | ACZ18207.1 | [12] |
Uga_95/1 | Uganda | IX | AAABNABBNABBNABBaaBBNABNaBA | 27 | CAJ90783.1 | [16] |