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Table 2 Primers used for qRT-PCR

From: Depletion of polycistronic transcripts using short interfering RNAs: cDNA synthesis method affects levels of non-targeted genes determined by quantitative PCR

Target

Forward primer (5’ to 3’)

Reverse primer (5’ to 3’)

HPV16 E7

AGGAGGATGAAATAGATGGTCC

CTTTGTACGCACAACCGAAGC

(nt 662–773)

HPV16 E6

AGCGACCCAGAAAGTTACCA

GCATAAATCCCGAAAAGCAA

(nt 105–219)

HPV16 E2

GGAGACTCTTTGCCAACGTTTA

CACATTCTAGGCGCATGTGT

(nt 2931–3080)

GAPDH

TGCACCACCAACTGCTTAGC

GGCATGGACTGTGGTCATGAG

TBP

Hs_TBP_1_SG (Qiagen)

ACTB

Hs_ACTB_2_SG (Qiagen)