Figure 7

Phylogenetic trees of Tlr1 proteins shared with transpovirons or virophages. A, Superfamily 1 helicase. B, Tlr1 6F protein. Branches with the bootstrap support (expected-likelihood weights) less than 0.5 were collapsed. Genome contexts are shown by same color scheme as on Figure 1. Sequences marked with an astericks (*) were taken from Repbase [20]. For other sequences, the species name abbreviation and the GenBank identification numbers are indicated; tr stands for transpoviron; env stands for environmental (metagenomic) sequence. Species abbreviations: Acaca, Acanthamoeba castellanii mamavirus; Acatu, Acanthocystis turfacea Chlorella virus 1; Batsp, Bathycoccus sp. RCC1105 virus BpV2; Dicdi, Dictyostelium discoideum AX4; Ectsi, Ectocarpus siliculosus; Emihu, Emiliania huxleyi virus 84; Entdi, Entamoeba dispar SAW760; Guith, Guillardia theta; Homsa, Homo sapiens; Hydma, Hydra magnipapillata; Invir, Invertebrate iridescent virus 6; Lacph, Lactococcus phage 949; Megch, Megavirus chiliensis; Megco, Megavirus courdo7; Micpu, Micromonas pusilla virus PL1; Micsp, Micromonas sp. RCC1109 virus MpV1; Mimle, Mimivirus lentille; MouMo, Moumouvirus Monve; OrgLa, Organic Lake phycodnavirus 1; Ostlu, Ostreococcus lucimarinus virus OlV1; Ostta, Ostreococcus tauri virus RT-2011; Ostvi, Ostreococcus virus OsV5; Parbu, Paramecium bursaria Chlorella virus NY2A; Phagl, Phaeocystis globosa virus 12T; Polpa, Polysphondylium pallidum PN500; Wisir, Wiseana iridescent virus. Taxa abbreviations: E8, stramenopiles; Ea, Amoebozoa; El, Opisthokonta; f3, Siphoviridae; l2, Iridovirus; n2, mimiviruses; q0, unassigned Phycodnaviridae; q1, Chlorovirus; q2, Coccolithovirus; q4, Prasinovirus. The color code is as in Figure 2.