Table 2 Bankground of Japanese encephalitis virus strains used in this study
Strain | Source | Genotype | Geographical location | Year | GenBank accession no./reference | |
|---|---|---|---|---|---|---|
ORF | E gene | |||||
Beijing-1 | Human | III | China | 1948 | L48961 | L48961 |
CH1392 | Mosquito | III | Taiwan | 1990 | AF254452 | U44960.1 |
FU | Human | II | Australia | 1995 | AF217620 | L43565.1 |
GP78 | Human | III | India | 1978 | AF075723 | AF075723 |
SA14-14-2 | Vaccin strain | III | China | 1954 | AF315119.1 | AF315119.1 |
JaGAr01 | Mosquito | III | Japan | 1959 | AF069076 | AF069076 |
WTP | Mosquito | II | Malaysia | 1970 | HQ223286 | U70421 |
K94P05 | Mosquito | I | Korea | 1994 | AF04555 | U34929 |
JKT5441 | Mosquito | II | Indonesia | 1981 | AF045551 | U34929 |
JKT6468 | Mosquito | IV | Indonesia | 1981 | AY184212 | U70407 |
Ishikawa | Mosquito | I | Japan | 1998 | AB051292 | AB051292 |
Ling | Human | III | Taiwan | 1965 | L78128 | L78128 |
RP-9 | Mosquito | III | Taiwan | 1985 | AF014161 | AF014161 |
47 | Human | III | China | 1950s | AY243827 | AY243827 |
SA14 | Mosquito | III | China | 1960 | U14163 | AY243850 |
K87P39 | Mosquito | III | Korea | 1987 | AY585243 | AY585243 |
P20778 | Human | III | India | 1958 | AF080251 | Z34096 |
CH21955A | Mosquito | III | Taiwan | 1994 | AF221500 | AF221500 |
ML11 | Vaccine | III | Japan | 1981 | AY508812 | U70412 |
jaOArS982 | Mosquito | III | Japan | 1982 | M18370 | M18370 |
Nakayama | Human | III | Japan | 1935 | EF571853 | AF112297 |
JKT7003 | Mosquito | IV | Indonesia | 1981 | U70408 | |
Sagiyama | Mosquito | III | Japan | 1957 | U70419 | |
Kamiyama | Human | III | Japan | 1966 | AB379813 | |
K82P01 | Mosquito | III | Japan | 1982 | U34926 | |
826309 | Human | III | India | 1982 | Z34094 | |
ThCMAr6793 | Mosquito | I | Thaliand | 1993 | D45363 | |
JKT1724 | Mosquito | III | Indonesia | 1979 | U70404 | |
SH-53 | Mosquito | I | China | 2001 | AY555757 | |
PhAn1242 | Pig | III | Philippines | 1984 | U70417 | |